HTLV1 Target gene Detail Information

> SSBP2 Gene Search Result


Gene Information
Gene Name SSBP2
Gene ID 23635
Gene Full Name single stranded DNA binding protein 2
Gene Alias HSPC116|SOSS-B2
Transcripts ENSG00000145687
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID P81877
HGNC ID HGNC:15831
OMIM ID 607389
Summary This gene encodes a subunit of a protein complex that interacts with single-stranded DNA and is involved in the DNA damage response and maintenance of genome stability. The encoded protein may also play a role in telomere repair. A variant of this gene may be associated with survival in human glioblastoma patients. [provided by RefSeq, Sep 2016]
Target gene [SSBP2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002430 chr5 37 74 132 243 View
6002431 chr5 37 74 132 243 View
6002435 chr5 165 30 47 242 View
6012856 chr5 0 21 0 21 View
6019050 chr5 5 3 0 8 View
6029539 chr5 1 0 0 1 View

Target gene [SSBP2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SSBP2 peak across samples

Peak Plot