HTLV1 Target gene Detail Information

> STX8 Gene Search Result


Gene Information
Gene Name STX8
Gene ID 9482
Gene Full Name syntaxin 8
Gene Alias CARB
Transcripts ENSG00000170310
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;Cytosol;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9UNK0
HGNC ID HGNC:11443
OMIM ID 604203
Summary The gene is a member of the syntaxin family. The encoded protein is involved in protein trafficking from early to late endosomes via vesicle fusion and exocytosis. A related pseudogene has been identified on chromosome 12. Alternative splicing results in multiple transcript variants. [provided by RefSeq, May 2010]
Target gene [STX8] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001773 chr17 100 87 163 350 View
6019929 chr17 0 7 0 7 View
6021795 chr17 2 1 2 5 View
6027498 chr17 2 0 0 2 View
6032373 chr17 0 0 0 0 View

Target gene [STX8] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - STX8 peak across samples

Peak Plot