HTLV1 Target gene Detail Information

> SUGP1 Gene Search Result


Gene Information
Gene Name SUGP1
Gene ID 57794
Gene Full Name SURP and G-patch domain containing 1
Gene Alias F23858|RBP|SF4
Transcripts ENSG00000105705
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8IWZ8
HGNC ID HGNC:18643
OMIM ID 607992
Summary SF4 is a member of the SURP family of splicing factors.[supplied by OMIM, Sep 2003]
Target gene [SUGP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6022580 chr19 5 0 0 5 View

Target gene [SUGP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - SUGP1 peak across samples

Peak Plot