HBV Target gene Detail Information

> TBC1D23 Gene Search Result


Gene Information
Gene Name TBC1D23
Gene ID 55773
Gene Full Name TBC1 domain family member 23
Gene Alias NS4ATP1|PCH11
Transcripts ENSG00000036054
Virus HBV
Gene Type protein-coding
HPA Location Info Golgi apparatus;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NUY8
HGNC ID HGNC:25622
OMIM ID 617687
Summary Involved in brain development; retrograde transport, endosome to Golgi; and vesicle tethering to Golgi. Located in WASH complex; cytoplasmic vesicle; and trans-Golgi network. Implicated in pontocerebellar hypoplasia type 11. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [TBC1D23] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002071 chr3 295 40 19 354 View

Target gene [TBC1D23] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE64877 		Chip-seq 2 Illumina Genome Analyzer (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - TBC1D23 peak across samples

Peak Plot

> Dataset: GSE68402 - TBC1D23 peak across samples

Peak Plot

> Dataset: GSE270130 - TBC1D23 peak across samples

Peak Plot

> Dataset: GSE64877 - TBC1D23 peak across samples

Peak Plot

> Dataset: GSE131257 - TBC1D23 peak across samples

Peak Plot