Gene Information
|
Gene Name
|
TCF12 |
|
Gene ID
|
6938
|
|
Gene Full Name
|
transcription factor 12 |
|
Gene Alias
|
CRS3|HEB|HH26|HTF4|HsT17266|TCF-12|bHLHb20|p64 |
|
Transcripts
|
ENSG00000140262
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Nucleoplasm, Nuclear speckles; 
|
|
Membrane Info
|
Cancer-related genes, Disease related genes, Human disease related genes, Predicted intracellular proteins, Transcription factors |
|
Uniport_ID
|
Q99081
|
|
HGNC ID
|
HGNC:11623
|
|
OMIM ID
|
600480 |
|
Summary
|
The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jul 2008] |
Target gene [TCF12] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6001154 |
chr15 |
102 |
206 |
256 |
564 |
View |
| 6001870 |
chr15 |
97 |
213 |
18 |
328 |
View |
| 6005545 |
chr15 |
16 |
63 |
6 |
85 |
View |
| 6012370 |
chr15 |
22 |
1 |
0 |
23 |
View |
| 6021673 |
chr15 |
5 |
0 |
0 |
5 |
View |
| 6024200 |
chr15 |
3 |
0 |
0 |
3 |
View |
| 6030166 |
chr15 |
0 |
1 |
0 |
1 |
View |
| 6030866 |
chr15 |
0 |
0 |
0 |
0 |
View |
| 6032887 |
chr15 |
0 |
0 |
0 |
0 |
View |
Target gene [TCF12] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE224047
|
RNA-seq |
10 |
Illumina NextSeq 500 (Homo sapiens) |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - TCF12 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
