HTLV1 Target gene Detail Information

> TMTC4 Gene Search Result


Gene Information
Gene Name TMTC4
Gene ID 84899
Gene Full Name transmembrane O-mannosyltransferase targeting cadherins 4
Gene Alias DFNB122
Transcripts ENSG00000125247
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Enzymes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5T4D3
HGNC ID HGNC:25904
OMIM ID 618203
Summary This gene encodes a transmembrane protein that belongs to family of proteins containing an N-terminal transmembrane domain and a C-terminal tetratricopeptide repeat (TPR) domain. TPR domains mediate protein-protein interactions in various cellular processes, such as synaptic vesicle fusion, protein folding, and protein translocation. A pseudogene of this gene has been defined on chromosome 5. [provided by RefSeq, Apr 2017]
Target gene [TMTC4] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011691 chr13 5 18 2 25 View
6022552 chr13 2 3 0 5 View
6032793 chr13 0 0 0 0 View

Target gene [TMTC4] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TMTC4 peak across samples

Peak Plot