HTLV1 Target gene Detail Information

> TNFRSF19 Gene Search Result


Gene Information
Gene Name TNFRSF19
Gene ID 55504
Gene Full Name TNF receptor superfamily member 19
Gene Alias TAJ|TAJ-alpha|TRADE|TROY
Transcripts ENSG00000127863
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus;Nucleoplasm;
Membrane Info Plasma proteins, Predicted membrane proteins
Uniport_ID Q9NS68
HGNC ID HGNC:11915
OMIM ID 606122
Summary The protein encoded by this gene is a member of the TNF-receptor superfamily. This receptor is highly expressed during embryonic development. It has been shown to interact with TRAF family members, and to activate JNK signaling pathway when overexpressed in cells. This receptor is capable of inducing apoptosis by a caspase-independent mechanism, and it is thought to play an essential role in embryonic development. Alternatively spliced transcript variants encoding distinct isoforms have been described. [provided by RefSeq, Jul 2008]
Target gene [TNFRSF19] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001629 chr13 93 233 57 383 View
6008223 chr13 45 2 0 47 View
6019021 chr13 5 3 0 8 View
6028543 chr13 1 0 0 1 View

Target gene [TNFRSF19] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TNFRSF19 peak across samples

Peak Plot