HBV Target gene Detail Information

> TOX Gene Search Result


Gene Information
Gene Name TOX
Gene ID 9760
Gene Full Name thymocyte selection associated high mobility group box
Gene Alias TOX1
Transcripts ENSG00000198846
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli fibrillar center;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID O94900
HGNC ID HGNC:18988
OMIM ID 606863
Summary The protein encoded by this gene contains a HMG box DNA binding domain. HMG boxes are found in many eukaryotic proteins involved in chromatin assembly, transcription and replication. This protein may function to regulate T-cell development.[provided by RefSeq, Apr 2009]
Target gene [TOX] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1002954 chr8 172 11 0 183 View
1003345 chr8 95 21 26 142 View
1007266 chr8 26 1 1 28 View
1018421 chr8 0 0 0 0 View
1022948 chr8 26 1 1 28 View
1043349 chr8 36 1 1 38 View

Target gene [TOX] related to Omics data
Data ID Experiment type Sample number Platform
GSE252863 scRNA-seq 10 Illumina HiSeq 2500 (Homo sapiens)
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
S
  GSE247322
scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
GSE131257 ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE247322 - Gene expression in cell subsets