HTLV1 Target gene Detail Information

> TRAF3IP1 Gene Search Result


Gene Information
Gene Name TRAF3IP1
Gene ID 26146
Gene Full Name TRAF3 interacting protein 1
Gene Alias CFAP116|FAP116|IFT54|MIP-T3|MIPT3|SLSN9
Transcripts ENSG00000204104
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear bodies, Primary cilium transition zone;Nucleoplasm, Nucleoli fibrillar center;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q8TDR0
HGNC ID HGNC:17861
OMIM ID 607380
Summary The protein encoded by this gene interacts with TNF receptor-associated factor 3, tethering it to cytoskeletal microtubules. The encoded protein is also an inhibitor of the innate type I IFN response. Defects in this gene are a cause of Senior-Loken syndrome 9. [provided by RefSeq, Mar 2017]
Target gene [TRAF3IP1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6021178 chr2 6 0 0 6 View

Target gene [TRAF3IP1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TRAF3IP1 peak across samples

Peak Plot