HTLV1 Target gene Detail Information

> TRAPPC10 Gene Search Result


Gene Information
Gene Name TRAPPC10
Gene ID 7109
Gene Full Name trafficking protein particle complex subunit 10
Gene Alias EHOC-1|EHOC1|GT334|NEDMISS|TMEM1|TRS130|TRS30
Transcripts ENSG00000160218
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID P48553
HGNC ID HGNC:11868
OMIM ID 602103
Summary The protein encoded by this gene is a transmembrane protein found in the cis-Golgi complex. The encoded protein is part of the multisubunit transport protein particle (TRAPP) complex and may be involved in vesicular transport from the endoplasmic reticulum to the Golgi. Mutations in this gene could be responsible for the Unverricht-Lundborg type of progressive myoclonus epilepsy, or for autoimmune polyglandular disease type 1. [provided by RefSeq, Jul 2008]
Target gene [TRAPPC10] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003658 chr21 44 23 81 148 View
6009078 chr21 38 0 1 39 View
6014210 chr21 16 1 0 17 View

Target gene [TRAPPC10] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TRAPPC10 peak across samples

Peak Plot