HTLV1 Target gene Detail Information

> TRAT1 Gene Search Result


Gene Information
Gene Name TRAT1
Gene ID 50852
Gene Full Name T cell receptor associated transmembrane adaptor 1
Gene Alias HSPC062|TCRIM|TRIM|pp29/30
Transcripts ENSG00000163519
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Mitotic spindle, Centriolar satellite;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q6PIZ9
HGNC ID HGNC:30698
OMIM ID 604962
Summary Predicted to enable transmembrane receptor protein tyrosine kinase adaptor activity. Acts upstream of or within negative regulation of receptor recycling; negative regulation of transport; and positive regulation of signal transduction. Located in centriolar satellite; mitotic spindle; and plasma membrane. Part of T cell receptor complex. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [TRAT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6027546 chr3 0 1 1 2 View

Target gene [TRAT1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TRAT1 peak across samples

Peak Plot