HTLV1 Target gene Detail Information

> TRIM50 Gene Search Result


Gene Information
Gene Name TRIM50
Gene ID 135892
Gene Full Name tripartite motif containing 50
Gene Alias TRIM50A
Transcripts ENSG00000146755
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;
Membrane Info Enzymes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q86XT4
HGNC ID HGNC:19017
OMIM ID 612548
Summary Enables identical protein binding activity. Predicted to be involved in innate immune response. Predicted to act upstream of or within regulation of establishment of protein localization. Located in cytosol. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [TRIM50] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6023334 chr7 2 1 1 4 View

Target gene [TRIM50] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TRIM50 peak across samples

Peak Plot