HTLV1 Target gene Detail Information

> TSPAN5 Gene Search Result


Gene Information
Gene Name TSPAN5
Gene ID 10098
Gene Full Name tetraspanin 5
Gene Alias NET-4|NET4|TM4SF9|TSPAN-5
Transcripts ENSG00000168785
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;
Membrane Info Predicted membrane proteins
Uniport_ID P62079
HGNC ID HGNC:17753
OMIM ID 613136
Summary The protein encoded by this gene is a member of the transmembrane 4 superfamily, also known as the tetraspanin family. Most of these members are cell-surface proteins that are characterized by the presence of four hydrophobic domains. The proteins mediate signal transduction events that play a role in the regulation of cell development, activation, growth and motility. [provided by RefSeq, Jul 2008]
Target gene [TSPAN5] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010532 chr4 11 17 2 30 View
6028335 chr4 1 0 0 1 View
6030963 chr4 0 0 0 0 View

Target gene [TSPAN5] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TSPAN5 peak across samples

Peak Plot