HTLV1 Target gene Detail Information

> TSPEAR Gene Search Result


Gene Information
Gene Name TSPEAR
Gene ID 54084
Gene Full Name thrombospondin type laminin G domain and EAR repeats
Gene Alias C21orf29|DFNB98|ECTD14|STHAG10|TSP-EAR
Transcripts ENSG00000175894
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted in other tissues;
Membrane Info Disease related genes, Human disease related genes, Predicted secreted proteins
Uniport_ID Q8WU66
HGNC ID HGNC:1268
OMIM ID 612920
Summary This gene encodes a protein that contains a N-terminal thrombospondin-type laminin G domain and several tandem arranged epilepsy-associated repeats (EARs). A mutation in this gene is the cause of autosomal recessive deafness-98. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012]
Target gene [TSPEAR] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6025515 chr21 3 0 0 3 View

Target gene [TSPEAR] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TSPEAR peak across samples

Peak Plot