HTLV1 Target gene Detail Information

> TYW1 Gene Search Result


Gene Information
Gene Name TYW1
Gene ID 55253
Gene Full Name tRNA-yW synthesizing protein 1 homolog
Gene Alias RSAFD1|TYW1A|YPL207W
Transcripts ENSG00000198874
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli, Nucleoli rim;
Membrane Info Enzymes, Predicted membrane proteins
Uniport_ID Q9NV66
HGNC ID HGNC:25598
OMIM ID 611243
Summary Wybutosine (yW) is a hypermodified guanosine found in phenylalanine tRNA adjacent to the anticodon that stabilizes codon-anticodon interactions in the ribosome. In yeast, the homolog of this gene is essential for the synthesis of wybutosine. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2015]
Target gene [TYW1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001411 chr7 418 23 7 448 View
6010366 chr7 28 1 2 31 View

Target gene [TYW1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - TYW1 peak across samples

Peak Plot