HTLV1 Target gene Detail Information

> UBASH3A Gene Search Result


Gene Information
Gene Name UBASH3A
Gene ID 53347
Gene Full Name ubiquitin associated and SH3 domain containing A
Gene Alias CLIP4|STS-2|TULA|TULA-1
Transcripts ENSG00000160185
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nuclear speckles, Cytosol;
Membrane Info Predicted intracellular proteins
Uniport_ID P57075
HGNC ID HGNC:12462
OMIM ID 605736
Summary This gene encodes one of two family members belonging to the T-cell ubiquitin ligand (TULA) family. Both family members can negatively regulate T-cell signaling. This family member can facilitate growth factor withdrawal-induced apoptosis in T cells, which may occur via its interaction with AIF, an apoptosis-inducing factor. Alternative splicing of this gene results in multiple transcript variants. [provided by RefSeq, Aug 2011]
Target gene [UBASH3A] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000564 chr21 728 293 216 1237 View
6002194 chr21 19 119 134 272 View

Target gene [UBASH3A] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - UBASH3A peak across samples

Peak Plot