HTLV1 Target gene Detail Information

> UBE2W Gene Search Result


Gene Information
Gene Name UBE2W
Gene ID 55284
Gene Full Name ubiquitin conjugating enzyme E2 W
Gene Alias UBC-16|UBC16
Transcripts ENSG00000104343
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoli;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q96B02
HGNC ID HGNC:25616
OMIM ID 614277
Summary This gene encodes a nuclear-localized ubiquitin-conjugating enzyme (E2) that, along with ubiquitin-activating (E1) and ligating (E3) enzymes, coordinates the addition of a ubiquitin moiety to existing proteins. The encoded protein promotes the ubiquitination of Fanconi anemia complementation group proteins and may be important in the repair of DNA damage. There is a pseudogene for this gene on chromosome 1. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Aug 2012]
Target gene [UBE2W] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6011240 chr8 26 1 0 27 View
6029573 chr8 0 1 0 1 View
6029574 chr8 0 1 0 1 View

Target gene [UBE2W] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - UBE2W peak across samples

Peak Plot