Gene Information
|
Gene Name
|
VPS39 |
|
Gene ID
|
23339
|
|
Gene Full Name
|
VPS39 subunit of HOPS complex |
|
Gene Alias
|
TLP|VAM6|hVam6p |
|
Transcripts
|
ENSG00000166887
|
|
Virus
|
MCV |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
|
|
Membrane Info
|
Plasma proteins, Predicted intracellular proteins |
|
Uniport_ID
|
Q96JC1
|
|
HGNC ID
|
HGNC:20593
|
|
OMIM ID
|
612188 |
|
Summary
|
This gene encodes a protein that may promote clustering and fusion of late endosomes and lysosomes. The protein may also act as an adaptor protein that modulates the transforming growth factor-beta response by coupling the transforming growth factor-beta receptor complex to the Smad pathway. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jul 2014] |
Target gene [VPS39] related to virus gene/protein/region 
Mutation Table: if previous studies reported that target gene was related to virus gene/region/protein, the information in this literature was listed in this section
Target gene [VPS39] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
C GSE147406
|
Chip-seq |
39 |
Illumina NextSeq 500 (Homo sapiens) |
|
C GSE124856
|
Chip-seq |
8 |
Illumina NextSeq 500 (Homo sapiens) |
|
C GSE69877
|
Chip-seq |
10 |
Illumina HiSeq 2000 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens) |
|
C GSE230758
|
Chip-seq |
20 |
Illumina HiSeq 2500 (Homo sapiens) |
|
GSE118056
|
scRNA-seq |
4 |
Illumina NovaSeq 6000 (Homo sapiens) |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE147406 - VPS39 peak across samples
|
Peak Plot
|
> Dataset: GSE124856 - VPS39 peak across samples
|
Peak Plot
|
> Dataset: GSE69877 - VPS39 peak across samples
|
Peak Plot
|
> Dataset: GSE230758 - VPS39 peak across samples
|
Peak Plot
|
|
|
MCV Target gene Detail Information
