HTLV1 Target gene Detail Information

> VPS51 Gene Search Result


Gene Information
Gene Name VPS51
Gene ID 738
Gene Full Name VPS51 subunit of GARP complex
Gene Alias ANG2|ANG3|C11orf2|C11orf3|FFR|PCH13
Transcripts ENSG00000149823
Virus HTLV1
Gene Type protein-coding
HPA Location Info Golgi apparatus, Vesicles;Nucleoli;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q9UID3
HGNC ID HGNC:1172
OMIM ID 615738
Summary This gene encodes a member of the vacuolar protein sorting-associated protein 51 family. The encoded protein is a component of the Golgi-associated retrograde protein complex which acts as a tethering factor for carriers in retrograde transport from the early and late endosomes to the trans-Golgi network. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Dec 2012]
Target gene [VPS51] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6005536 chr11 83 2 0 85 View

Target gene [VPS51] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - VPS51 peak across samples

Peak Plot