HTLV1 Target gene Detail Information

> VWA2 Gene Search Result


Gene Information
Gene Name VWA2
Gene ID 340706
Gene Full Name von Willebrand factor A domain containing 2
Gene Alias AMACO|CCSP-2|CCSP2|NET42
Transcripts ENSG00000165816
Virus HTLV1
Gene Type protein-coding
HPA Location Info Secreted to extracellular matrix;
Membrane Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q5GFL6
HGNC ID HGNC:24709
OMIM ID 618281
Summary This gene encodes a member of the von Willebrand factor A-like domain protein superfamily. The encoded protein is localized to the extracellular matrix and may serve as a structural component in basement membranes or in anchoring structures on scaffolds of collagen VII or fibrillin. This gene has been linked to type 1A diabetes and is a candidate serological marker for colon cancer. [provided by RefSeq, Jan 2013]
Target gene [VWA2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6007218 chr10 56 0 2 58 View

Target gene [VWA2] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - VWA2 peak across samples

Peak Plot