HTLV1 Target gene Detail Information

> WDPCP Gene Search Result


Gene Information
Gene Name WDPCP
Gene ID 51057
Gene Full Name WD repeat containing planar cell polarity effector
Gene Alias BBS15|C2orf86|CHDTHP|CPLANE5|FRITZ|FRTZ
Transcripts ENSG00000143951
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear bodies, Flagellar centriole;Endoplasmic reticulum;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID O95876
HGNC ID HGNC:28027
OMIM ID 613580
Summary This gene encodes a cytoplasmic WD40 repeat protein. A similar gene in frogs encodes a planar cell polarity protein that plays a critical role in collective cell movement and ciliogenesis by mediating septin localization. Mutations in this gene are associated with Bardet-Biedl syndrome 15 and may also play a role in Meckel-Gruber syndrome. Alternative splicing results in multiple transcript variants. [provided by RefSeq, Jun 2014]
Target gene [WDPCP] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6002756 chr2 11 187 13 211 View
6006501 chr2 49 16 3 68 View
6009481 chr2 34 2 0 36 View
6013670 chr2 9 9 0 18 View
6024847 chr2 2 1 0 3 View
6028482 chr2 0 1 0 1 View
6029030 chr2 1 0 0 1 View
6030769 chr2 0 0 0 0 View

Target gene [WDPCP] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - WDPCP peak across samples

Peak Plot