HPV Target gene Detail Information

> XACT Gene Search Result


Gene Information
Gene Name XACT
Gene ID 105463123
Gene Full Name X active specific transcript
Gene Alias -
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:45056
OMIM ID 300901
Summary This gene produces a spliced long non-coding RNA that is thought to play a role in the control of X-chromosome inactivation (XCI). This transcript has been shown to specifically coat the active X chromosome in human pluripotent cells. [provided by RefSeq, Mar 2015]
Target gene [XACT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006222 chrX 2 0 0 2 View
5011160 chrX 2 0 0 2 View
5016599 chrX 3 2 0 5 View

Target gene [XACT] related to Omics data
Data ID Experiment type Sample number Platform
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - XACT peak across samples

Peak Plot