HBV Target gene Detail Information

> XYLT1 Gene Search Result


Gene Information
Gene Name XYLT1
Gene ID 64131
Gene Full Name xylosyltransferase 1
Gene Alias DBQD2|PXYLT1|XT-I|XT1|XTI|XYLTI|xylT-I
Transcripts ENSG00000103489
Virus HBV
Gene Type protein-coding
HPA Location Info Plasma membrane;Endoplasmic reticulum;Secreted to blood;
Membrane Info Disease related genes, Enzymes, Human disease related genes, Metabolic proteins, Potential drug targets, Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q86Y38
HGNC ID HGNC:15516
OMIM ID 608124
Summary This locus encodes a xylosyltransferase enzyme. The encoded protein catalyzes transfer of UDP-xylose to serine residues of an acceptor protein substrate. This transfer reaction is necessary for biosynthesis of glycosaminoglycan chains. Mutations in this gene have been associated with increased severity of pseudoxanthoma elasticum.[provided by RefSeq, Nov 2009]
Target gene [XYLT1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004451 chr16 40 7 33 80 View
1005253 chr16 40 6 11 57 View
1006353 chr16 38 1 0 39 View
1010576 chr16 11 0 0 11 View
1011839 chr16 7 1 0 8 View
1012508 chr16 5 1 0 6 View
1012580 chr16 5 1 0 6 View
1013685 chr16 3 1 0 4 View
1023592 chr16 40 7 33 80 View
1023593 chr16 40 6 11 57 View
1023665 chr16 5 1 0 6 View
1023831 chr16 3 1 0 4 View
1023832 chr16 11 0 0 11 View
1042176 chr16 12 2 0 14 View
1042177 chr16 5 1 0 6 View
1042178 chr16 8 4 0 12 View

Target gene [XYLT1] related to Omics data
Data ID Experiment type Sample number Platform
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
S
  GSE247322 		scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100400 		Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a feature/violin plot will be displayed.


> Dataset: GSE247322 - Gene expression in cell subsets