HTLV1 Target gene Detail Information

> ZFHX3 Gene Search Result


Gene Information
Gene Name ZFHX3
Gene ID 463
Gene Full Name zinc finger homeobox 3
Gene Alias ATBF1|ATBT|ATFB8|C16orf47|SCA4|ZFH-3|ZNF927
Transcripts ENSG00000140836
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Cancer-related genes, Human disease related genes, Plasma proteins, Predicted intracellular proteins, Transcription factors
Uniport_ID Q15911
HGNC ID HGNC:777
OMIM ID 104155
Summary This gene encodes a transcription factor with multiple homeodomains and zinc finger motifs, and regulates myogenic and neuronal differentiation. The encoded protein suppresses expression of the alpha-fetoprotein gene by binding to an AT-rich enhancer motif. The protein has also been shown to negatively regulate c-Myb, and transactivate the cell cycle inhibitor cyclin-dependent kinase inhibitor 1A (also known as p21CIP1). This gene is reported to function as a tumor suppressor in several cancers, and sequence variants of this gene are also associated with atrial fibrillation. Multiple transcript variants expressed from alternate promoters and encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]
Target gene [ZFHX3] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000612 chr16 63 746 328 1137 View
6004768 chr16 61 12 32 105 View
6006766 chr16 23 37 3 63 View
6007426 chr16 34 19 2 55 View
6009294 chr16 19 12 7 38 View
6015211 chr16 5 8 1 14 View
6015213 chr16 5 8 1 14 View
6015453 chr16 14 0 0 14 View
6020097 chr16 5 2 0 7 View
6022625 chr16 5 0 0 5 View
6029062 chr16 0 1 0 1 View
6029222 chr16 1 0 0 1 View
6031412 chr16 0 0 0 0 View
6033735 chr16 16 3 4 23 View
6033736 chr16 276 16 100 392 View

Target gene [ZFHX3] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ZFHX3 peak across samples

Peak Plot