HTLV1 Target gene Detail Information

> ZNF2 Gene Search Result


Gene Information
Gene Name ZNF2
Gene ID 7549
Gene Full Name zinc finger protein 2
Gene Alias A1-5|ZNF661|Zfp661
Transcripts ENSG00000275111
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane, Cytosol;Nucleoplasm;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q9BSG1
HGNC ID HGNC:12991
OMIM ID 194500
Summary The protein encoded by this gene belongs to the C2H2-type zinc-finger protein family. The exact function of this gene is not known, however, zinc-finger proteins are known to interact with DNA and function as transcription regulators. Alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Apr 2014]
Target gene [ZNF2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000927 chr2 694 9 0 703 View
6022890 chr2 4 0 0 4 View
6028166 chr2 1 0 0 1 View
6028458 chr2 0 1 0 1 View

Target gene [ZNF2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ZNF2 peak across samples

Peak Plot