HTLV1 Target gene Detail Information

> ZNF407 Gene Search Result


Gene Information
Gene Name ZNF407
Gene ID 55628
Gene Full Name zinc finger protein 407
Gene Alias SIMHA
Transcripts ENSG00000215421
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Plasma membrane;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins, Transcription factors
Uniport_ID Q9C0G0
HGNC ID HGNC:19904
OMIM ID 615894
Summary This gene encodes a zinc finger protein whose exact function is not known. It may be involved in transcriptional regulation. Several alternatively spliced transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Sep 2009]
Target gene [ZNF407] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000692 chr18 375 188 410 973 View
6010204 chr18 24 7 1 32 View
6015302 chr18 3 9 2 14 View
6018961 chr18 7 1 0 8 View
6018975 chr18 7 0 1 8 View
6022254 chr18 2 3 0 5 View
6029453 chr18 1 0 0 1 View
6029633 chr18 1 0 0 1 View

Target gene [ZNF407] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ZNF407 peak across samples

Peak Plot