HTLV1 Target gene Detail Information

> ZPR1 Gene Search Result


Gene Information
Gene Name ZPR1
Gene ID 8882
Gene Full Name ZPR1 zinc finger
Gene Alias GKAF|ZNF259
Transcripts ENSG00000109917
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles;
Membrane Info Disease related genes, Predicted intracellular proteins
Uniport_ID O75312
HGNC ID HGNC:13051
OMIM ID 603901
Summary The protein encoded by this gene is found in the cytoplasm of quiescent cells but translocates to the nucleolus in proliferating cells. The encoded protein interacts with survival motor neuron protein (SMN1) to enhance pre-mRNA splicing and to induce neuronal differentiation and axonal growth. Defects in this gene or the SMN1 gene can cause spinal muscular atrophy. Two transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Nov 2015]
Target gene [ZPR1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6000164 chr11 3088 202 212 3502 View
6006049 chr11 75 0 1 76 View

Target gene [ZPR1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ZPR1 peak across samples

Peak Plot