HIV Target Gene Summary

The Target Genes module provides information on selected target genes affected by viral gene/protein/region or viral fragment integration.

• The Impact column in the table provides information on whether the gene has been mentioned by mutation or integration-related studies.
• The Description column in the table provides information on whether the gene provides viral-related omics data (what levels of data are included) and whether the gene provides figures to visualize the analysis results.

Gene name initials:

ID	Target gene	Virus	Impact	Literature Count	Description	Detail
1	R3HCC1L	HIV	I	1	E C M F	View
2	R3HDM1	HIV	I	2	E S C M F	View
3	R3HDM2	HIV	I	3	E S C M F	View
4	R3HDM4	HIV	I	1	E S C M F	View
5	RAB10	HIV	I	1	E S C M F	View
6	RAB11A	HIV	I	1	E S C M F	View
7	RAB11FIP1	HIV	I	1	E S C M F	View
8	RAB11FIP3	HIV	I	2	E C M F	View
9	RAB14	HIV	I	2	E S C M F	View
10	RAB1A	HIV	I	1	E S C M F	View
11	RAB22A	HIV	I	1	E S C M F	View
12	RAB26	HIV	I	1	E C M F	View
13	RAB27B	HIV	I	1	E S C M F	View
14	RAB28	HIV	I	1	E C M F	View
15	RAB2B	HIV	I	1	E S C M F	View
16	RAB35	HIV	I	1	E S C M F	View
17	RAB3B	HIV	I	1	E S C M F	View
18	RAB3D	HIV	I	2	E S C M F	View
19	RAB3GAP1	HIV	I	1	E S C M F	View
20	RAB3GAP2	HIV	I	1	E S C M F	View
21	RAB3IP	HIV	I	1	E S C M F	View
22	RAB40C	HIV	I	1	E C M F	View
23	RAB5B	HIV	I	2	E S C M F	View
24	RAB6A	HIV	I	2	E S C M F	View
25	RAB6B	HIV	I	1	E C M F	View
26	RAB7A	HIV	I	3	E S C M F	View
27	RAB8B	HIV	I	2	E S C M F	View
28	RABEP1	HIV	I	4	E S C M F	View
29	RABEP2	HIV	I	1	E S C M F	View
30	RABGAP1	HIV	I	1	E S C M F	View
31	RABGAP1L	HIV	I	2	E S C M F	View
32	RABGEF1P1	HIV	I	1	E C M F	View
33	RABL3	HIV	I	1	E S C M F	View
34	RABL6	HIV	I	5	E S C M F	View
35	RAC1	HIV	I	1	E S C M F	View
36	RAC2	HIV	I	1	E S C M F	View
37	RACGAP1	HIV	I	1	E S C M F	View
38	RACK1	HIV	I	1	E S M F	View
39	RAD18	HIV	I	1	E C M F	View
40	RAD21	HIV	I	1	E S C M F	View
41	RAD23B	HIV	I	1	E S C M F	View
42	RAD50	HIV	I	2	E S C M F	View
43	RAD51	HIV	I	2	E S C M F	View
44	RAD51AP1	HIV	I	1	E S C M F	View
45	RAD51B	HIV	I	2	E C M F	View
46	RAD51C	HIV	I	1	E S C M F	View
47	RAD51L3-RFFL	HIV	I	1	E M	View
48	RAD52	HIV	I	1	E C M F	View
49	RAD54B	HIV	I	1	E C M F	View
50	RAD54L2	HIV	I	3	E S C M F	View
51	RAD9B	HIV	I	1	E C M F	View
52	RAE1	HIV	I	1	E S C M F	View
53	RAF1	HIV	I	1	E S C M F	View
54	RAG1	HIV	I	1	E C M F	View
55	RALBP1	HIV	I	1	E S C M F	View
56	RALGAPA1P1	HIV	I	1	E C F	View
57	RALGAPA2	HIV	I	1	E S C M F	View
58	RALGAPB	HIV	I	1	E C M F	View
59	RALGDS	HIV	I	1	E S C M F	View
60	RALGPS1	HIV	I	1	E S C M F	View
61	RALGPS2	HIV	I	2	E S C M F	View
62	RALY	HIV	I	1	E S C M F	View
63	RALYL	HIV	I	1	E C M F	View
64	RANBP2	HIV	I	1	E S C M F	View
65	RANBP3	HIV	I	2	E C M F	View
66	RANBP3-DT	HIV	I	1	E C M F	View
67	RANBP9	HIV	I	1	E S C M F	View
68	RANGAP1	HIV	I	1	E S C M F	View
69	RAP1A	HIV	I	3	E S C M F	View
70	RAP1B	HIV	I	2	E S C M F	View
71	RAP1GAP2	HIV	I	1	E S C M F	View
72	RAP1GDS1	HIV	I	1	E S C M F	View
73	RAP2A	HIV	I	1	E S C M F	View
74	RAPGEF1	HIV	I	1	E S C M F	View
75	RAPGEF2	HIV	I	2	E S C M F	View
76	RAPGEF5	HIV	I	1	E S C M F	View
77	RAPGEF6	HIV	I	3	E S C M F	View
78	RAPH1	HIV	I	2	E S C M F	View
79	RARG	HIV	I	1	E S C M F	View
80	RARS1	HIV	I	1	E C M F	View
81	RASA1	HIV	I	1	E S C M F	View
82	RASA2	HIV	I	4	E S C M F	View
83	RASA3	HIV	I	1	E S C M F	View
84	RASA4CP	HIV	I	1	E C M F	View
85	RASA4DP	HIV	I	1	E C F	View
86	RASAL3	HIV	I	3	E S C M F	View
87	RASGRF2	HIV	I	2	E S C M F	View
88	RASGRP1	HIV	I	1	E S C M F	View
89	RASGRP2	HIV	I	2	E S C M F	View
90	RASSF3	HIV	I	2	E S C M F	View
91	RASSF5	HIV	I	1	E S C M F	View
92	RAVER1	HIV	I	2	E C M F	View
93	RAVER2	HIV	I	1	E C M F	View
94	RB1	HIV	I	2	E S C M F	View
95	RB1CC1	HIV	I	1	E S C M F	View
96	RBBP4	HIV	I	1	E S C M F	View
97	RBBP5	HIV	I	1	E C M F	View
98	RBBP6	HIV	I	2	E S C M F	View
99	RBCK1	HIV	I	1	E S C M F	View
100	RBFOX1	HIV	I	1	E C M F	View
101	RBFOX2	HIV	I	1	E S C M F	View
102	RBKS	HIV	I	2	E S C M F	View
103	RBL1	HIV	I	4	E S C M F	View
104	RBL2	HIV	I	2	E S C M F	View
105	RBM10	HIV	I	1	E C M F	View
106	RBM14	HIV	I	1	E S C M F	View
107	RBM14-RBM4	HIV	I	1	E C M F	View
108	RBM15	HIV	I	1	E S C M F	View
109	RBM15-AS1	HIV	I	1	E C M F	View
110	RBM15B	HIV	I	1	E S C M F	View
111	RBM17	HIV	I	1	E S C M F	View
112	RBM23	HIV	I	1	E S C M F	View
113	RBM26	HIV	I	1	E S C M F	View
114	RBM33	HIV	I	2	E S C M F	View
115	RBM39	HIV	I	4	E S C M F	View
116	RBM4	HIV	I	2	E S C M F	View
117	RBM45	HIV	I	1	E S C M F	View
118	RBM4B	HIV	I	1	E S C M F	View
119	RBM5	HIV	I	3	E S C M F	View
120	RBM6	HIV	I	2	E S C M F	View
121	RBMS1	HIV	I	2	E S C M F	View
122	RBMS2	HIV	I	1	E S C M F	View
123	RBMS3	HIV	I	1	E S C M F	View
124	RBPJ	HIV	I	1	E S C M F	View
125	RBX1	HIV	I	2	E S C M F	View
126	RC3H1	HIV	I	2	E S C M F	View
127	RC3H2	HIV	I	1	E S C M F	View
128	RCAN3	HIV	I	1	E S C M F	View
129	RCBTB2	HIV	I	1	E S C M F	View
130	RCHY1	HIV	I	1	E S C M F	View
131	RCOR3	HIV	I	1	E S C M F	View
132	RCSD1	HIV	I	1	E S C M F	View
133	RDH13	HIV	I	1	E C M F	View
134	RDX	HIV	I	1	E S C M F	View
135	RECK	HIV	I	1	E S C M F	View
136	RECQL	HIV	I	1	E S C M F	View
137	REDIC1	HIV	I	1	E C F	View
138	REL-DT	HIV	I	1	E C M F	View
139	RELA-DT	HIV	I	2	E C F	View
140	RELB	HIV	I	1	E S C M F	View
141	RELCH	HIV	I	1	E C M F	View
142	RELN	HIV	I	1	E C M F	View
143	REPS1	HIV	I	1	E C M F	View
144	RERE	HIV	I	4	E S C M F	View
145	RESF1	HIV	I	1	E S C M F	View
146	REST	HIV	I	1	E S C M F	View
147	RETREG1	HIV	I	1	E S C M F	View
148	RETREG2	HIV	I	1	E S C F	View
149	RETREG3	HIV	I	1	E S C M F	View
150	REV1	HIV	I	2	E S C M F	View
151	REV3L	HIV	I	2	E S C M F	View
152	REXO2	HIV	I	1	E S C M F	View
153	REXO5	HIV	I	1	E S C F	View
154	RFC3	HIV	I	1	E S C M F	View
155	RFLNB	HIV	I	1	E S C M F	View
156	RFT1	HIV	I	2	E C M F	View
157	RFTN1	HIV	I	2	E S C M F	View
158	RFWD3	HIV	I	1	E S C M F	View
159	RFX1	HIV	I	1	E C M F	View
160	RFX2	HIV	I	1	E S C M F	View
161	RFX3	HIV	I	1	E S C M F	View
162	RFX7	HIV	I	1	E C M F	View
163	RGL2	HIV	I	1	E S C M F	View
164	RGPD5	HIV	I	1	E S M F	View
165	RGS10	HIV	I	1	E S C M F	View
166	RGS5	HIV	I	1	E S C M F	View
167	RGS6	HIV	I	1	E S C M F	View
168	RGS7	HIV	I	1	E S C M F	View
169	RGS8	HIV	I	1	E C M F	View
170	RGSL1	HIV	I	1	E C M F	View
171	RHBDF2	HIV	I	2	E S C M F	View
172	RHEB	HIV	I	1	E S C M F	View
173	RHOA	HIV	I	2	E S C M F	View
174	RHOG	HIV	I	1	E S C M F	View
175	RHOH	HIV	I	1	E S C M F	View
176	RHOT1	HIV	I	1	E S C M F	View
177	RIC1	HIV	I	1	E S C M F	View
178	RIC8A	HIV	I	1	E S C M F	View
179	RICTOR	HIV	I	2	E S C M F	View
180	RIF1	HIV	I	1	E S C M F	View
181	RILPL2	HIV	I	1	E S C M F	View
182	RIMBP2	HIV	I	1	E C M F	View
183	RIMKLB	HIV	I	1	E S C M F	View
184	RIMS2	HIV	I	1	E C M F	View
185	RIMS3	HIV	I	1	E C M F	View
186	RIN3	HIV	I	1	E S C M F	View
187	RINL	HIV	I	1	E S C M F	View
188	RIOK3	HIV	I	1	E S C M F	View
189	RIPK2	HIV	I	1	E S C M F	View
190	RIPOR2	HIV	I	2	E S C M F	View
191	RLF	HIV	I	2	E S C M F	View
192	RLN1	HIV	I	1	E C M F	View
193	RMDN1	HIV	I	1	E S C M F	View
194	RMI2	HIV	I	2	E S C M F	View
195	RMND5A	HIV	I	1	E S C M F	View
196	RNASEH2B	HIV	I	1	E S C M F	View
197	RNF103	HIV	I	1	E S C M F	View
198	RNF11	HIV	I	1	E S C M F	View
199	RNF111	HIV	I	3	E C M F	View
200	RNF121	HIV	I	2	E C M F	View
201	RNF123	HIV	I	1	E C M F	View
202	RNF125	HIV	I	1	E S C M F	View
203	RNF13	HIV	I	2	E S C M F	View
204	RNF138	HIV	I	1	E S C M F	View
205	RNF145	HIV	I	1	E S C M F	View
206	RNF149	HIV	I	1	E S C M F	View
207	RNF157	HIV	I	4	E S C M F	View
208	RNF166	HIV	I	1	E S C M F	View
209	RNF169	HIV	I	1	E S C M F	View
210	RNF19A	HIV	I	1	E S C M F	View
211	RNF19B	HIV	I	2	E S C M F	View
212	RNF20	HIV	I	1	E C M F	View
213	RNF213	HIV	I	2	E S C M F	View
214	RNF213-AS1	HIV	I	2	E C M F	View
215	RNF214	HIV	I	1	E S C M F	View
216	RNF216	HIV	I	3	E S C M F	View
217	RNF216P1	HIV	I	1	E C M F	View
218	RNF217	HIV	I	1	E C M F	View
219	RNF24	HIV	I	3	E S C M F	View
220	RNF34	HIV	I	1	E S C M F	View
221	RNF38	HIV	I	3	E S C M F	View
222	RNF4	HIV	I	1	E S C M F	View
223	RNF43	HIV	I	1	E S C M F	View
224	RNF44	HIV	I	1	E S C M F	View
225	RNF5P1	HIV	I	1	E C M F	View
226	RNF8	HIV	I	1	E C M F	View
227	RNFT1	HIV	I	1	E S C M F	View
228	RNGTT	HIV	I	1	E S C M F	View
229	RNLS	HIV	I	1	E C M F	View
230	RNMT	HIV	I	1	E S C M F	View
231	RNPC3	HIV	I	1	E S C M F	View
232	RNPS1	HIV	I	3	E S C M F	View
233	RNU5D-1	HIV	I	1	E C M F	View
234	RNU5F-1	HIV	I	1	E C M F	View
235	RNU6-189P	HIV	I	1	E	View
236	RO60	HIV	I	1	E S C F	View
237	ROBO2	HIV	I	3	E C M F	View
238	ROCK1	HIV	I	1	E S C M F	View
239	ROCK2	HIV	I	1	E S C M F	View
240	RORA	HIV	I	1	E S C M F	View
241	RORA-AS1	HIV	I	1	E S C M F	View
242	RORA-AS2	HIV	I	1	E C M F	View
243	RP9	HIV	I	1	E S C M F	View
244	RPA1	HIV	I	1	E S C M F	View
245	RPA3	HIV	I	3	E S C M F	View
246	RPAIN	HIV	I	2	E S C M F	View
247	RPAP2	HIV	I	2	E S C M F	View
248	RPAP3	HIV	I	2	E S C M F	View
249	RPF2	HIV	I	1	E S C M F	View
250	RPGRIP1L	HIV	I	1	E C M F	View
251	RPH3A	HIV	I	1	E C M F	View
252	RPL11	HIV	I	1	E S C M F	View
253	RPL13AP5	HIV	I	1	E C M F	View
254	RPL23AP32	HIV	I	1	E C M F	View
255	RPL23P9	HIV	I	1		View
256	RPL28	HIV	I	1	E S C M F	View
257	RPL7L1	HIV	I	1	E S C M F	View
258	RPN2	HIV	I	1	E S C M F	View
259	RPP30	HIV	I	1	E S C M F	View
260	RPRD1A	HIV	I	1	E C M F	View
261	RPRD1B	HIV	I	2	E S C M F	View
262	RPRD2	HIV	I	2	E C M F	View
263	RPS10-NUDT3	HIV	I	1	E S C M F	View
264	RPS11	HIV	I	1	E S C M F	View
265	RPS18	HIV	I	1	E S C M F	View
266	RPS19	HIV	I	2	E S C M F	View
267	RPS19BP1	HIV	I	1	E S C M F	View
268	RPS19P5	HIV	I	1	E	View
269	RPS2P48	HIV	I	1	E	View
270	RPS6KA1	HIV	I	1	E S C M F	View
271	RPS6KA3	HIV	I	3	E S C M F	View
272	RPS6KA4	HIV	I	1	E S C M F	View
273	RPS6KA5	HIV	I	3	E S C M F	View
274	RPS6KA6	HIV	I	1	E C M F	View
275	RPS6KB1	HIV	I	1	E S C M F	View
276	RPS6KC1	HIV	I	1	E S C M F	View
277	RPSA2	HIV	I	1	E C F	View
278	RPTOR	HIV	I	6	E S C M F	View
279	RRAS2	HIV	I	1	E S C M F	View
280	RRM1	HIV	I	1	E S C M F	View
281	RRN3P2	HIV	I	1	E C M F	View
282	RRP12	HIV	I	2	E S C M F	View
283	RRP15	HIV	I	1	E S C M F	View
284	RRP1B	HIV	I	1	E S C M F	View
285	RSBN1	HIV	I	1	E S C M F	View
286	RSBN1L	HIV	I	1	E S C M F	View
287	RSF1	HIV	I	1	E S C M F	View
288	RSPRY1	HIV	I	1	E C M F	View
289	RSRC1	HIV	I	1	E S C M F	View
290	RSRC2	HIV	I	2	E S C M F	View
291	RSU1	HIV	I	1	E S C M F	View
292	RSU1P2	HIV	I	1	E C M F	View
293	RTCB	HIV	I	1	E S C M F	View
294	RTF1	HIV	I	1	E S C M F	View
295	RTN3	HIV	I	1	E S C M F	View
296	RTN4	HIV	I	1	E S C M F	View
297	RTTN	HIV	I	2	E S C M F	View
298	RUFY1	HIV	I	1	E S C M F	View
299	RUFY2	HIV	I	1	E C M F	View
300	RUNDC1	HIV	I	1	E S C M F	View
301	RUNDC3B	HIV	I	1	E C M F	View
302	RUNX1	HIV	I	1	E S C M F	View
303	RUNX2	HIV	I	3	E S C M F	View
304	RUNX3	HIV	I	2	E S C M F	View
305	RWDD1	HIV	I	1	E S C M F	View
306	RXYLT1	HIV	I	1	E C M F	View
307	RYK	HIV	I	1	E C M F	View
308	RYR1	HIV	I	1	E C M F	View

Contents Description and
Data Download

Table Note

I
Target gene is affected by virus integration.

M
Target gene is associated with the virus gene/protein/region.

E
Target gene is detected in the expression profiling data.

S
Target gene is detected in the single-cell transcriptome data.

C
Target gene is detected in the genome binding/occupancy profiling data.

M
Target gene is detected in the methylation profiling data.

F
Target gene provides figures to visualize the analysis results.
F indicates that this gene has visualization results on at least one type of sequencing data.