HIV Target gene Detail Information

> RBM15B Gene Search Result


Gene Information
Gene Name RBM15B
Gene ID 29890
Gene Full Name RNA binding motif protein 15B
Gene Alias HUMAGCGB|HsOTT3|OTT3
Transcripts ENSG00000259956
Virus HIV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q8NDT2
HGNC ID HGNC:24303
OMIM ID 612602
Summary Members of the SPEN (Split-end) family of proteins, including RBM15B, have repressor function in several signaling pathways and may bind to RNA through interaction with spliceosome components (Hiriart et al., 2005 [PubMed 16129689]).[supplied by OMIM, Feb 2009]
Target gene [RBM15B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4003336 chr3 60 3 1 64 View
4003378 chr3 60 2 1 63 View
4003379 chr3 60 2 1 63 View
4003380 chr3 60 2 1 63 View
4003426 chr3 61 1 0 62 View
4003522 chr3 59 1 0 60 View
4003523 chr3 59 1 0 60 View
4003524 chr3 59 1 0 60 View

Target gene [RBM15B] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE221688 		Chip-seq;scATAC-Seq;scRNA-Seq 12 Illumina NovaSeq 6000 (Homo sapiens)
GSE99737 RNA-seq 9 Illumina HiSeq 2500 (Homo sapiens)
GSE144332 RNA-seq 75 NextSeq 550 (Homo sapiens)
C
  GSE165705 		Chip-seq 30 Illumina NovaSeq 6000 (Homo sapiens)
GSE164264 RNA-seq 6 BGISEQ-500 (Homo sapiens)
GSE262621 RNA-seq 70 Illumina NovaSeq 6000 (Homo sapiens)
GSE128121 RNA-seq 16 Illumina HiSeq 4000 (Homo sapiens)
GSE162914 RNA-seq 211 Illumina HiSeq 2500 (Homo sapiens)
GSE279982 Methylation profiling (Array) 576 Infinium MethylationEPIC
C
  GSE144329 		ATAC-seq 96 NextSeq 550 (Homo sapiens)
GSE205204 RNA-seq 14 Illumina NovaSeq 6000 (Homo sapiens)
GSE125686 RNA-seq 62 Illumina HiSeq 2000 (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens);Illumina NextSeq 500 (Homo sapiens)
GSE198339 scRNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE220859 		Chip-seq 11 Illumina NovaSeq 6000 (Homo sapiens)
GSE165708 RNA-seq 100 Illumina HiSeq 4000 (Homo sapiens)
C
  GSE211651 		Chip-seq;RNA-seq;PRO-seq 39 Illumina NextSeq 500 (Homo sapiens);Illumina NovaSeq 6000 (Homo sapiens)
C
  GSE100376 		ATAC-seq 24 Illumina NextSeq 500 (Homo sapiens)
GSE165132 RNA-seq 56 NextSeq 550 (Homo sapiens)
C
  GSE100266 		ATAC-seq;Chip-seq;RNA-seq 32 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE165703 		ATAC-seq 82 Illumina HiSeq 4000 (Homo sapiens)
GSE246082 RNA-seq 6 Illumina HiSeq 4000 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE221688 - RBM15B peak across samples

Peak Plot

> Dataset: GSE165705 - RBM15B peak across samples

Peak Plot

> Dataset: GSE144329 - RBM15B peak across samples

Peak Plot

> Dataset: GSE220859 - RBM15B peak across samples

Peak Plot

> Dataset: GSE211651 - RBM15B peak across samples

Peak Plot

> Dataset: GSE100376 - RBM15B peak across samples

Peak Plot

> Dataset: GSE100266 - RBM15B peak across samples

Peak Plot

> Dataset: GSE165703 - RBM15B peak across samples

Peak Plot