Virus Dataset Detail

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Dataset Information
Accession GSE221688
Status 2024/2/1
Title The latent HIV reservoir in the brain of people with HIV under antiretroviral therapy
Organism Homo sapiens
Experiment type Expression profiling by high throughput sequencing;Genome binding/occupancy profiling by high throughput sequencing
Summary This SuperSeries is composed of the following SubSeries: GSE221685 The latent HIV reservoir in the brain of people with HIV under antiretroviral therapy (ChIP-Seq) GSE221686 The latent HIV reservoir in the brain of people with HIV under antiretroviral therapy (scATAC-Seq) GSE221687 The latent HIV reservoir in the brain of people with HIV under antiretroviral therapy (scRNA-Seq)
Samples
GSM ID Sample info Characteristics Description
GSM6893074 LG05_H3K27ac cell type:Microglia; chip antibody:H3K27ac polyclonal (Active Motif, Catalog No: 39135) -
GSM6893075 LG14_H3K27ac cell type:Microglia; chip antibody:H3K27ac polyclonal (Active Motif, Catalog No: 39135) -
GSM6893076 LG15_H3K27ac cell type:Microglia; chip antibody:H3K27ac polyclonal (Active Motif, Catalog No: 39135) -
GSM6893077 LG05_input cell type:Microglia; chip antibody:input -
GSM6893078 LG14_input cell type:Microglia; chip antibody:input -
GSM6893079 LG15_input cell type:Microglia; chip antibody:input -
GSM6893080 LG05 cell type:CD45+ cells; tissue:Frontal cortex (BA9); strain:Male; age:57 years 10x Genomics
GSM6893081 LG14 cell type:CD45+ cells; tissue:Frontal cortex (BA9); strain:Male; age:59 years 10x Genomics
GSM6893082 LG15 cell type:CD45+ cells; tissue:Frontal cortex (BA9); strain:Male; age:88 years 10x Genomics
GSM6893083 scRNA-Seq LG05 cell type:CD45+ cells; tissue:Frontal cortex (BA9); strain:Male; age:57 years 10x Genomics Single cell 3' RNA
GSM6893084 scRNA-Seq LG14 cell type:CD45+ cells; tissue:Frontal cortex (BA9); strain:Male; age:59 years 10x Genomics Single cell 3' RNA
GSM6893085 scRNA-Seq LG15 cell type:CD45+ cells; tissue:Frontal cortex (BA9); strain:Male; age:88 years 10x Genomics Single cell 3' RNA
Platform GPL24676  : Illumina NovaSeq 6000 (Homo sapiens)
Literature   
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