HTLV1 Target gene Detail Information

> ACSS1 Gene Search Result


Gene Information
Gene Name ACSS1
Gene ID 84532
Gene Full Name acyl-CoA synthetase short chain family member 1
Gene Alias ACAS2L|ACECS1|AceCS2L
Transcripts ENSG00000154930
Virus HTLV1
Gene Type protein-coding
HPA Location Info
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NUB1
HGNC ID HGNC:16091
OMIM ID 614355
Summary This gene encodes a mitochondrial acetyl-CoA synthetase enzyme. A similar protein in mice plays an important role in the tricarboxylic acid cycle by catalyzing the conversion of acetate to acetyl CoA. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene. [provided by RefSeq, Nov 2011]
Target gene [ACSS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004758 chr20 90 4 11 105 View
6006064 chr20 16 56 3 75 View

Target gene [ACSS1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ACSS1 peak across samples

Peak Plot