EBV Target gene Detail Information

> CHKB-CPT1B Gene Search Result


Gene Information
Gene Name CHKB-CPT1B
Gene ID 386593
Gene Full Name CHKB-CPT1B readthrough (NMD candidate)
Gene Alias CHKL-CPT1B|CPT1-M|CPT1B|CPTI-M
Transcripts ENSG00000254413
Virus EBV
Gene Type ncRNA
HGNC ID HGNC:41998
Summary The genes CHKB and CPT1B are adjacent on chromosome 22 and read-through transcripts are expressed that include exons from both loci. The read-through transcripts are candidates for nonsense-mediated mRNA decay (NMD) and are unlikely to express proteins. [provided by RefSeq, Jun 2009]
Target gene [CHKB-CPT1B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000240 chr22 48 6 0 54 View

Target gene [CHKB-CPT1B] related to Omics data
Data ID Experiment type Sample number Platform
GSE198332 Methylation profiling (Array) 7 Infinium MethylationEPIC
GSE100458 Expression array 14 [HG-U133_Plus_2] Affymetrix Human Genome U133 Plus 2.0 Array [CDF: Brainarray HGU133Plus2_Hs_ENTREZG_v21]
GSE177046 RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
GSE102203 Expression array 10 [HuGene-2_0-st] Affymetrix Human Gene 2.0 ST Array [probe set (exon) version]
GSE85599 Expression array 17 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]