HTLV1 Target gene Detail Information

> CLGN Gene Search Result


Gene Information
Gene Name CLGN
Gene ID 1047
Gene Full Name calmegin
Gene Alias -
Transcripts ENSG00000153132
Virus HTLV1
Gene Type protein-coding
HPA Location Info Endoplasmic reticulum;Equatorial segment, Mid piece;
Membrane Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID O14967
HGNC ID HGNC:2060
OMIM ID 601858
Summary Calmegin is a testis-specific endoplasmic reticulum chaperone protein. CLGN may play a role in spermatogeneisis and infertility. [provided by RefSeq, Jul 2008]
Target gene [CLGN] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6030365 chr4 0 0 0 0 View
6030379 chr4 0 0 0 0 View

Target gene [CLGN] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - CLGN peak across samples

Peak Plot