HPV Target gene Detail Information

> CT45A6 Gene Search Result


Gene Information
Gene Name CT45A6
Gene ID 541465
Gene Full Name cancer/testis antigen family 45 member A6
Gene Alias CT45-5|CT45-6|CT45.6|CT45A5|CT45A7
Transcripts ENSG00000278289
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm, Nucleoli;
Membrane Info Predicted intracellular proteins
Uniport_ID P0DMU7
HGNC ID HGNC:33271
OMIM ID 300797
Target gene [CT45A6] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5003902 chrX 0 0 1 1 View

Target gene [CT45A6] related to Omics data
Data ID Experiment type Sample number Platform
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
M
  TCGA_CESC 		DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: TCGA_CESC - CT45A6 methylation across samples

Volcano Plot (delta beta value > 0.2 & FDR < 0.05)

Bar Plot (delta beta value > 0.2)