HTLV1 Target gene Detail Information

> GABBR1 Gene Search Result


Gene Information
Gene Name GABBR1
Gene ID 2550
Gene Full Name gamma-aminobutyric acid type B receptor subunit 1
Gene Alias GABABR1|GABBR1-3|GB1|GPRC3A|NEDLC
Transcripts ENSG00000204681
Virus HTLV1
Gene Type protein-coding
HPA Location Info Basal body, Cytosol;Intracellular and membrane;
Membrane Info FDA approved drug targets, G-protein coupled receptors, Plasma proteins, Predicted membrane proteins
Uniport_ID Q9UBS5
HGNC ID HGNC:4070
OMIM ID 603540
Summary This gene encodes a receptor for gamma-aminobutyric acid (GABA), which is the main inhibitory neurotransmitter in the mammalian central nervous system. This receptor functions as a heterodimer with GABA(B) receptor 2. Defects in this gene may underlie brain disorders such as schizophrenia and epilepsy. Alternative splicing generates multiple transcript variants, but the full-length nature of some of these variants has not been determined. [provided by RefSeq, Jan 2016]
Target gene [GABBR1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6006822 chr6 19 33 11 63 View

Target gene [GABBR1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GABBR1 peak across samples

Peak Plot