HTLV1 Target gene Detail Information

> GALNT10 Gene Search Result


Gene Information
Gene Name GALNT10
Gene ID 55568
Gene Full Name polypeptide N-acetylgalactosaminyltransferase 10
Gene Alias GALNACT10|PPGALNACT10|PPGANTASE10
Transcripts ENSG00000164574
Virus HTLV1
Gene Type protein-coding
HPA Location Info Plasma membrane;Nucleoplasm, Golgi apparatus;Intracellular and membrane;
Membrane Info Enzymes, Metabolic proteins, Predicted intracellular proteins
Uniport_ID Q86SR1
HGNC ID HGNC:19873
OMIM ID 608043
Summary This gene encodes a member of the GalNAc polypeptide N-acetylgalactosaminyltransferases. These enzymes catalyze the first step in the synthesis of mucin-type oligosaccharides. These proteins transfer GalNAc from UDP-GalNAc to either serine or threonine residues of polypeptide acceptors. The protein encoded by this locus may have increased catalytic activity toward glycosylated peptides compared to activity toward non-glycosylated peptides.[provided by RefSeq, Apr 2010]
Target gene [GALNT10] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6010263 chr5 15 17 0 32 View
6017126 chr5 3 8 0 11 View
6023526 chr5 1 3 0 4 View

Target gene [GALNT10] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - GALNT10 peak across samples

Peak Plot