Gene Information
|
Gene Name
|
ITGA9 |
|
Gene ID
|
3680
|
|
Gene Full Name
|
integrin subunit alpha 9 |
|
Gene Alias
|
ALPHA-RLC|ITGA4L|RLC |
|
Transcripts
|
ENSG00000144668
|
|
Virus
|
HTLV1 |
|
Gene Type
|
protein-coding |
|
HPA Location Info
|
Vesicles;Nucleoplasm, Plasma membrane, Cell Junctions;Intracellular and membrane; 
|
|
Membrane Info
|
Human disease related genes, Predicted intracellular proteins, Predicted membrane proteins |
|
Uniport_ID
|
Q13797
|
|
HGNC ID
|
HGNC:6145
|
|
OMIM ID
|
603963 |
|
Summary
|
This gene encodes an alpha integrin. Integrins are heterodimeric integral membrane glycoproteins composed of an alpha chain and a beta chain that mediate cell-cell and cell-matrix adhesion. The protein encoded by this gene, when bound to the beta 1 chain, forms an integrin that is a receptor for VCAM1, cytotactin and osteopontin. Expression of this gene has been found to be upregulated in small cell lung cancers. [provided by RefSeq, Jul 2008] |
Target gene [ITGA9] related to VISs 
Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section
| DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
| 6006458 |
chr3 |
55 |
5 |
8 |
68 |
View |
| 6014331 |
chr3 |
16 |
1 |
0 |
17 |
View |
| 6015067 |
chr3 |
11 |
4 |
0 |
15 |
View |
| 6025276 |
chr3 |
3 |
0 |
0 |
3 |
View |
Target gene [ITGA9] related to Omics data
| Data ID |
Experiment type |
Sample number |
Platform |
|
GSE189602
|
Methylation profiling (Array) |
4 |
Infinium MethylationEPIC |
|
C GSE94732
|
Chip-seq |
24 |
Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens) |
|
GSE52244
|
Expression array |
15 |
[HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version] |
|
GSE19080
|
Expression array |
38 |
Homo sapiens 3K Immunoarray2 HTLV-1 JH |
|
GSE10789
|
Expression array |
6 |
NCI/ATC Hs-OperonV3 |
|
GSE168557
|
Expression array |
6 |
Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version) |
|
GSE136189
|
Methylation profiling (Array) |
40 |
Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip |
When the gene can detect a peak in the dataset, a peak plot will be displayed.
> Dataset: GSE94732 - ITGA9 peak across samples
|
Peak Plot
|
|
|
HTLV1 Target gene Detail Information
