HTLV1 Target gene Detail Information

> ITSN2 Gene Search Result


Gene Information
Gene Name ITSN2
Gene ID 50618
Gene Full Name intersectin 2
Gene Alias PRO2015|SH3D1B|SH3P18|SWA|SWAP
Transcripts ENSG00000198399
Virus HTLV1
Gene Type protein-coding
HPA Location Info Vesicles, Plasma membrane;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9NZM3
HGNC ID HGNC:6184
OMIM ID 604464
Summary This gene encodes a cytoplasmic protein which contains SH3 domains. This protein is a member of a family of proteins involved in clathrin-mediated endocytosis. Intersectin 2 is thought to regulate the formation of clathrin-coated vesicles and also may function in the induction of T cell antigen receptor (TCR) endocytosis. [provided by RefSeq, Jan 2017]
Target gene [ITSN2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008712 chr2 34 9 0 43 View
6017157 chr2 5 5 1 11 View
6021454 chr2 3 3 0 6 View

Target gene [ITSN2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - ITSN2 peak across samples

Peak Plot