HPV Target gene Detail Information

> LINC-PINT Gene Search Result


Gene Information
Gene Name LINC-PINT
Gene ID 378805
Gene Full Name long intergenic non-protein coding RNA, p53 induced transcript
Gene Alias LincRNA-Pint|MKLN1-AS1|PINT|PINT87aa|TISPL
Transcripts ENSG00000231721
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:26885
OMIM ID 618212
lncRNASNP2 ID LINC-PINT
Summary Involved in negative regulation of transcription by RNA polymerase II. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINC-PINT] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5003010 chr7 2 4 0 6 View
5007054 chr7 9 0 0 9 View
5009894 chr7 94 17 18 129 View
5009895 chr7 0 0 2 2 View
5009896 chr7 5 1 0 6 View
5013703 chr7 1194 77 27 1298 View

Target gene [LINC-PINT] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048
Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE226620 scRNA-seq 30 HiSeq X Ten (Homo sapiens)
GSE139324 scRNA-seq 63 Illumina NextSeq 500 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
C
  GSE143026
ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC-PINT peak across samples

Peak Plot


> Dataset: GSE143026 - LINC-PINT peak across samples

Peak Plot