HPV Target gene Detail Information

> LINC00862 Gene Search Result


Gene Information
Gene Name LINC00862
Gene ID 554279
Gene Full Name long intergenic non-protein coding RNA 862
Gene Alias C1orf98|SMIM16
Transcripts ENSG00000203721
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:21901
lncRNASNP2 ID LINC00862
Summary Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Target gene [LINC00862] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5016986 chr1 245 281 106 632 View

Target gene [LINC00862] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - LINC00862 peak across samples

Peak Plot

> Dataset: GSE143026 - LINC00862 peak across samples

Peak Plot