HPV Target gene Detail Information

> LINC01097 Gene Search Result


Gene Information
Gene Name LINC01097
Gene ID 285547
Gene Full Name long intergenic non-protein coding RNA 1097
Gene Alias -
Transcripts ENSG00000281202
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:27738
lncRNASNP2 ID LINC01097
Target gene [LINC01097] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5010918 chr4 39 1 4 44 View

Target gene [LINC01097] related to Omics data
Data ID Experiment type Sample number Platform
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)