HPV Target gene Detail Information

> LINC01191 Gene Search Result


Gene Information
Gene Name LINC01191
Gene ID 440900
Gene Full Name long intergenic non-protein coding RNA 1191
Gene Alias VIN|lnc-ACTR3
Transcripts ENSG00000234199
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:49595
lncRNASNP2 ID LINC01191
Target gene [LINC01191] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005064 chr2 6 0 0 6 View
5005707 chr2 1 0 0 1 View
5011414 chr2 0 0 0 0 View

Target gene [LINC01191] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - LINC01191 peak across samples

Peak Plot