HPV Target gene Detail Information

> LOC441666 Gene Search Result


Gene Information
Gene Name LOC441666
Gene ID 441666
Gene Full Name -
Gene Alias -
Transcripts ENSG00000291065
Virus HPV
Gene Type pseudo
Target gene [LOC441666] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5006472 chr10 23 4 4 31 View
5009731 chr10 8 0 0 8 View
5009750 chr10 23 0 0 23 View
5009788 chr10 4 0 0 4 View
5010561 chr10 195 0 0 195 View
5010755 chr10 1152 768 597 2517 View
5010792 chr10 9 0 0 9 View
5010828 chr10 1 0 1 2 View
5010869 chr10 50 3 0 53 View
5010909 chr10 0 2 0 2 View
5011520 chr10 73 1 0 74 View
5011805 chr10 6349 7348 1669 15366 View

Target gene [LOC441666] related to Omics data
Data ID Experiment type Sample number Platform
M
  GSE169622
Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE138080 Expression array 35 Agilent-014850 Whole Human Genome Microarray 4x44K G4112F (Feature Number version)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE55542 Expression array 36 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE143026 ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
GSE51993 Expression array 48 Illumina Human v2 MicroRNA expression beadchip;Illumina HumanHT-12 V4.0 expression beadchip
GSE55550 Expression array 155 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Probe Name version)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the query gene is differentially changed in the dataset, a volcano/bar plot will be displayed.


> Dataset: GSE169622 - LOC441666 methylation across samples

Volcano Plot (delta beta value > 0.2 & FDR < 0.05)


Bar Plot (delta beta value > 0.2)