HTLV1 Target gene Detail Information

> MYO1E Gene Search Result


Gene Information
Gene Name MYO1E
Gene ID 4643
Gene Full Name myosin IE
Gene Alias FSGS6|HuncM-IC|MYO1C
Transcripts ENSG00000157483
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm, Plasma membrane;Cytosol;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q12965
HGNC ID HGNC:7599
OMIM ID 601479
Summary This gene encodes a member of the nonmuscle class I myosins which are a subgroup of the unconventional myosin protein family. The unconventional myosin proteins function as actin-based molecular motors. Class I myosins are characterized by a head (motor) domain, a regulatory domain and a either a short or long tail domain. Among the class I myosins, this protein is distinguished by a long tail domain that is involved in crosslinking actin filaments. This protein localizes to the cytoplasm and may be involved in intracellular movement and membrane trafficking. Mutations in this gene are the cause of focal segmental glomerulosclerosis-6. This gene has been referred to as myosin IC in the literature but is distinct from the myosin IC gene located on chromosome 17. [provided by RefSeq, Jan 2012]
Target gene [MYO1E] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008270 chr15 42 1 4 47 View
6008271 chr15 42 1 4 47 View
6011761 chr15 21 4 0 25 View
6014746 chr15 16 0 0 16 View
6033708 chr15 3 2 0 5 View
6033709 chr15 43 6 0 49 View
6033710 chr15 54 19 0 73 View
6033711 chr15 213 48 146 407 View
6033712 chr15 165 40 49 254 View
6033713 chr15 9 6 2 17 View

Target gene [MYO1E] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - MYO1E peak across samples

Peak Plot