HTLV1 Target gene Detail Information

> NCAM2 Gene Search Result


Gene Information
Gene Name NCAM2
Gene ID 4685
Gene Full Name neural cell adhesion molecule 2
Gene Alias NCAM21
Transcripts ENSG00000154654
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nuclear bodies, Plasma membrane;
Membrane Info Plasma proteins, Predicted membrane proteins
Uniport_ID O15394
HGNC ID HGNC:7657
OMIM ID 602040
Summary The protein encoded by this gene belongs to the immunoglobulin superfamily. It is a type I membrane protein and may function in selective fasciculation and zone-to-zone projection of the primary olfactory axons. [provided by RefSeq, Jul 2008]
Target gene [NCAM2] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6003357 chr21 45 117 3 165 View
6009134 chr21 21 14 4 39 View
6015150 chr21 3 7 5 15 View
6016155 chr21 10 3 0 13 View
6021939 chr21 2 3 0 5 View
6022015 chr21 1 4 0 5 View
6031028 chr21 0 0 0 0 View
6031281 chr21 0 0 0 0 View

Target gene [NCAM2] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732
Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NCAM2 peak across samples

Peak Plot