HPV Target gene Detail Information

> NPSR1-AS1 Gene Search Result


Gene Information
Gene Name NPSR1-AS1
Gene ID 404744
Gene Full Name NPSR1 antisense RNA 1
Gene Alias AAA1
Transcripts ENSG00000197085
Virus HPV
Gene Type ncRNA
HGNC ID HGNC:22128
OMIM ID 608596
lncRNASNP2 ID NPSR1-AS1
Summary This gene is located within a region that has been associated with asthma susceptibility. The locus is considered non-protein-coding based on lack of protein homology and a lack of experimental support for an encoded protein. Three alternatively spliced transcript variants have been identified for this gene. [provided by RefSeq, May 2010]
Target gene [NPSR1-AS1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5005410 chr7 1 1 0 2 View
5006585 chr7 1 0 0 1 View
5009548 chr7 5 0 0 5 View

Target gene [NPSR1-AS1] related to Omics data
Data ID Experiment type Sample number Platform
C
  GSE183048 		Chip-seq 24 Illumina HiSeq 4000 (Homo sapiens)
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE183048 - NPSR1-AS1 peak across samples

Peak Plot

> Dataset: GSE143026 - NPSR1-AS1 peak across samples

Peak Plot