HTLV1 Target gene Detail Information

> NR4A1 Gene Search Result


Gene Information
Gene Name NR4A1
Gene ID 3164
Gene Full Name nuclear receptor subfamily 4 group A member 1
Gene Alias GFRP1|HMR|N10|NAK-1|NGFIB|NP10|NUR77|TR3
Transcripts ENSG00000123358
Virus HTLV1
Gene Type protein-coding
HPA Location Info Nucleoplasm;Nuclear membrane, Nucleoli fibrillar center, Nuclear speckles, Cytosol;
Membrane Info Nuclear receptors, Predicted intracellular proteins, Transcription factors
Uniport_ID P22736
HGNC ID HGNC:7980
OMIM ID 139139
Summary This gene encodes a member of the steroid-thyroid hormone-retinoid receptor superfamily. Expression is induced by phytohemagglutinin in human lymphocytes and by serum stimulation of arrested fibroblasts. The encoded protein acts as a nuclear transcription factor. Translocation of the protein from the nucleus to mitochondria induces apoptosis. Multiple transcript variants encoding different isoforms have been found for this gene. [provided by RefSeq, Jan 2011]
Target gene [NR4A1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004799 chr12 103 0 1 104 View
6004800 chr12 103 0 1 104 View
6006920 chr12 61 0 1 62 View
6008231 chr12 44 0 3 47 View

Target gene [NR4A1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - NR4A1 peak across samples

Peak Plot