HTLV1 Target gene Detail Information

> PITPNC1 Gene Search Result


Gene Information
Gene Name PITPNC1
Gene ID 26207
Gene Full Name phosphatidylinositol transfer protein cytoplasmic 1
Gene Alias M-RDGB-beta|MRDGBbeta|RDGB-BETA|RDGBB|RDGBB1
Transcripts ENSG00000154217
Virus HTLV1
Gene Type protein-coding
HPA Location Info Cytosol;Nucleoplasm;
Membrane Info Predicted intracellular proteins
Uniport_ID Q9UKF7
HGNC ID HGNC:21045
OMIM ID 605134
Summary This gene encodes a member of the phosphatidylinositol transfer protein family. The encoded cytoplasmic protein plays a role in multiple processes including cell signaling and lipid metabolism by facilitating the transfer of phosphatidylinositol between membrane compartments. Alternatively spliced transcript variants encoding multiple isoforms have been observed for this gene, and a pseudogene of this gene is located on the long arm of chromosome 1. [provided by RefSeq, May 2012]
Target gene [PITPNC1] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6001676 chr17 304 39 25 368 View
6006095 chr17 54 4 17 75 View
6013710 chr17 12 3 3 18 View
6027065 chr17 1 1 0 2 View

Target gene [PITPNC1] related to Omics data
Data ID Experiment type Sample number Platform
GSE189602 Methylation profiling (Array) 4 Infinium MethylationEPIC
C
  GSE94732 		Chip-seq 24 Illumina NextSeq 500 (Homo sapiens);illumina Genome Analyzer IIx (Homo sapiens)
GSE52244 Expression array 15 [HuEx-1_0-st] Affymetrix Human Exon 1.0 ST Array [probe set (exon) version]
GSE19080 Expression array 38 Homo sapiens 3K Immunoarray2 HTLV-1 JH
GSE10789 Expression array 6 NCI/ATC Hs-OperonV3
GSE224047 RNA-seq 10 Illumina NextSeq 500 (Homo sapiens)
GSE168557 Expression array 6 Agilent-039494 SurePrint G3 Human GE v2 8x60K Microarray 039381 (Feature Number version)
GSE136189 Methylation profiling (Array) 40 Illumina HumanMethylation450 BeadChip (HumanMethylation450_15017482);Illumina Infinium HumanMethylation850 BeadChip


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE94732 - PITPNC1 peak across samples

Peak Plot