HPV Target gene Detail Information

> POU5F1B Gene Search Result


Gene Information
Gene Name POU5F1B
Gene ID 5462
Gene Full Name POU class 5 homeobox 1B
Gene Alias OCT4-PG1|OCT4PG1|OTF3C|OTF3P1|POU5F1P1|POU5F1P4|POU5FLC20|POU5FLC8
Transcripts ENSG00000212993
Virus HPV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Predicted intracellular proteins, Transcription factors
Uniport_ID Q06416
HGNC ID HGNC:9223
OMIM ID 615739
Summary This intronless gene was thought to be a transcribed pseudogene of POU class 5 homeobox 1, however, it has been reported that this gene can encode a functional protein. The encoded protein is nearly the same length as and highly similar to the POU class 5 homeobox 1 transcription factor, has been shown to be a weak transcriptional activator and may play a role in carcinogenesis and eye development. [provided by RefSeq, Apr 2009]
Target gene [POU5F1B] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5000778 chr8 79 7 0 86 View
5001013 chr8 59 0 0 59 View
5001022 chr8 57 1 0 58 View
5001023 chr8 57 1 0 58 View
5001032 chr8 57 0 0 57 View
5001033 chr8 56 1 0 57 View
5001146 chr8 37 10 0 47 View
5001147 chr8 37 10 0 47 View
5001189 chr8 35 9 0 44 View
5001207 chr8 35 8 0 43 View
5001315 chr8 31 8 0 39 View
5001368 chr8 7 17 13 37 View
5001411 chr8 23 12 0 35 View
5001583 chr8 26 1 0 27 View
5001736 chr8 19 5 0 24 View
5001774 chr8 19 4 0 23 View
5001938 chr8 18 1 0 19 View
5001939 chr8 18 1 0 19 View
5001947 chr8 13 6 0 19 View
5002096 chr8 15 1 0 16 View
5002097 chr8 11 4 1 16 View
5002098 chr8 15 1 0 16 View
5003847 chr8 1 0 1 2 View
5003850 chr8 2 0 0 2 View
5003851 chr8 1 0 1 2 View
5004199 chr8 1 0 0 1 View
5004203 chr8 1 0 0 1 View
5004717 chr8 2674 3617 1541 7832 View
5016375 chr8 43 27 11 81 View
5016376 chr8 1 1 0 2 View
5016377 chr8 1 0 1 2 View
5016378 chr8 178 56 1 235 View
5017794 chr8 64 29 0 93 View
5017795 chr8 104 31 0 135 View
5017796 chr8 23 23 2 48 View
5017797 chr8 21 17 2 40 View
5017799 chr8 20 111 80 211 View
5017800 chr8 20 111 80 211 View
5017801 chr8 86 10 0 96 View
5017802 chr8 1 7 0 8 View
5017803 chr8 117 158 27 302 View

Target gene [POU5F1B] related to Omics data
Data ID Experiment type Sample number Platform
GSE169622 Methylation profiling (Array) 9 Infinium MethylationEPIC
GSE181805 Expression array 25 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
GSE196215 RNA-seq 8 Illumina NovaSeq 6000 (Homo sapiens)
GSE140662 Expression array 8 [HTA-2_0] Affymetrix Human Transcriptome Array 2.0 [transcript (gene) version]
TCGA_CESC DNA methylation sequencing;RNA-seq 288 TCGA
C
  GSE143026 		ATAC-seq;Chip-seq;RNA-seq 30 Illumina HiSeq 2500 (Homo sapiens)
GSE165883 RNA-seq 20 Illumina NextSeq 500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE143026 - POU5F1B peak across samples

Peak Plot