HBV Target gene Detail Information

> PRPF31 Gene Search Result


Gene Information
Gene Name PRPF31
Gene ID 26121
Gene Full Name pre-mRNA processing factor 31
Gene Alias NY-BR-99|PRP31|RP11|SNRNP61
Transcripts ENSG00000105618
Virus HBV
Gene Type protein-coding
HPA Location Info Nucleoplasm;
Membrane Info Disease related genes, Human disease related genes, Predicted intracellular proteins
Uniport_ID Q8WWY3
HGNC ID HGNC:15446
OMIM ID 606419
Summary This gene encodes a component of the spliceosome complex and is one of several retinitis pigmentosa-causing genes. When the gene product is added to the spliceosome complex, activation occurs.[provided by RefSeq, Jan 2009]
Target gene [PRPF31] related to VISs

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in this section


DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1000158 chr4 2007 1706 1424 5137 View
1000983 chr7 30 652 516 1198 View
1001084 chr16 530 349 214 1093 View
1001715 chr3 27 398 91 516 View
1003396 chr9 105 1 30 136 View
1004545 chr12 43 26 8 77 View
1004763 chr3 2 28 39 69 View
1004772 chr4 2 23 44 69 View
1005255 chr9 52 4 1 57 View
1005360 chr12 33 21 2 56 View
1006643 chr5 19 14 2 35 View
1007256 chr10 8 17 3 28 View
1007346 chr4 14 7 7 28 View
1008213 chr12 14 6 2 22 View
1008498 chr18 19 1 0 20 View
1008676 chr8 16 3 0 19 View
1010874 chr8 10 0 0 10 View
1012007 chr14 7 1 0 8 View
1012559 chr18 3 3 0 6 View
1012942 chr5 1 5 0 6 View
1012943 chr5 2 4 0 6 View
1012944 chr6 6 0 0 6 View
1013119 chr12 2 3 0 5 View
1014331 chr4 1 2 0 3 View
1014338 chr11 2 1 0 3 View
1015234 chr17 1 1 0 2 View
1015312 chr18 2 0 0 2 View
1016011 chr13 0 1 1 2 View
1016140 chr4 1 0 0 1 View
1016148 chr4 0 1 0 1 View
1016158 chr14 1 0 0 1 View
1016330 chr1 0 1 0 1 View
1016338 chr18 0 1 0 1 View
1017335 chr10 0 1 0 1 View
1017509 chr4 0 0 0 0 View
1017867 chr4 0 0 0 0 View
1019686 chr15 0 0 0 0 View
1019697 chr10 0 0 0 0 View
1019698 chr10 0 0 0 0 View
1019708 chr8 0 0 0 0 View

Target gene [PRPF31] related to Omics data
Data ID Experiment type Sample number Platform
GSE252863 scRNA-seq 10 Illumina HiSeq 2500 (Homo sapiens)
GSE236281 RNA-seq 12 Illumina MiSeq (Homo sapiens)
C
  GSE35465 		Chip-seq;RNA-seq 6 Illumina HiSeq 2000 (Homo sapiens)
C
  GSE68402 		Chip-seq 26 Illumina MiSeq (Homo sapiens);Illumina HiSeq 2500 (Homo sapiens)
GSE247322 scRNA-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
TCGA_LIHC_HBV DNA methylation sequencing;RNA-seq 97 TCGA
C
  GSE270130 		Chip-seq 27 Illumina NovaSeq 6000 (Homo sapiens)
GSE224901 RNA-seq 21 Illumina NovaSeq 6000 (Homo sapiens)
GSE100400 Chip-seq;RNA-seq;4C_cccDNA 31 Illumina NextSeq 500 (Homo sapiens);Illumina NextSeq 500 (Mus musculus)
GSE173897 RNA-seq 95 Illumina HiSeq 4000 (Homo sapiens)
GSE262515 RNA-seq 21 Illumina HiSeq 2500 (Homo sapiens);Illumina HiSeq 2500 (Mus musculus)
GSE110345 RNA-seq 4 Illumina HiSeq 2500 (Homo sapiens)
C
  GSE131257 		ATAC-seq;RNA-seq 19 Illumina HiSeq 2500 (Homo sapiens)
GSE94660 RNA-seq 42 Illumina HiSeq 2500 (Homo sapiens)


When the gene can detect a peak in the dataset, a peak plot will be displayed.


> Dataset: GSE35465 - PRPF31 peak across samples

Peak Plot

> Dataset: GSE68402 - PRPF31 peak across samples

Peak Plot

> Dataset: GSE270130 - PRPF31 peak across samples

Peak Plot

> Dataset: GSE131257 - PRPF31 peak across samples

Peak Plot